BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C08LP1|AL426006
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig684 1042 0.0
>3x_Contig684
Length = 2183
Score = 1042 bits (525), Expect = 0.0
Identities = 535/537 (99%), Gaps = 1/537 (0%)
Strand = Plus / Plus
Query: 2 atccttttcaaattcaactggngattagttggaaaccagctaaggtagaagcatctggca 61
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1648 atccttttcaaattcaactgg-gattagttggaaaccagctaaggtagaagcatctggca 1706
Query: 62 aagaagctgccaagttttctaagacatcgccaccaagctggttgttcgcgtttggatctg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1707 aagaagctgccaagttttctaagacatcgccaccaagctggttgttcgcgtttggatctg 1766
Query: 122 gttcatcgtcattggtttgaattttgatgtcagcttttggaataaattcaggaactataa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 gttcatcgtcattggtttgaattttgatgtcagcttttggaataaattcaggaactataa 1826
Query: 182 gctttgataggacggattgatagtagttaatgtctggtttaccatcatctccctttagac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 gctttgataggacggattgatagtagttaatgtctggtttaccatcatctccctttagac 1886
Query: 242 cataattgaacgcacgcaagtaagcagatgcaacgatgaagtggaagtgatctgggtttt 301
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1887 cataattgaacgcacgcaagttagcagatgcaacgatgaagtggaagtgatctgggtttt 1946
Query: 302 cgatattgaagactaatggttcaggggcacgctttggaccagaccagaatggctccccgg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1947 cgatattgaagactaatggttcaggggcacgctttggaccagaccagaatggctccccgg 2006
Query: 362 tggatgttgttgcatccttagggaagttgtaaagaaactgttggatatcataactaaact 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2007 tggatgttgttgcatccttagggaagttgtaaagaaactgttggatatcataactaaact 2066
Query: 422 tcttttcaaattctaatcttgcccatttgacacaatcttcaaagttgtaaggtctattgt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2067 tcttttcaaattctaatcttgcccatttgacacaatcttcaaagttgtaaggtctattgt 2126
Query: 482 ttagacaatcactaattgattctaagatacctttggcatctggggcttgtttcaaag 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2127 ttagacaatcactaattgattctaagatacctttggcatctggggcttgtttcaaag 2183
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5977
Number of Sequences: 1807
Number of extensions: 5977
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)